STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000006456Xylosyltransferase II. (740 aa)    
Predicted Functional Partners:
ENSCHAP00000042559
Xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I).
     
 0.925
ENSCHAP00000052398
annotation not available
    
 0.871
ENSCHAP00000043916
Xylosyltransferase I.
  
  
 
0.853
dcn
Decorin.
    
 0.609
ENSCHAP00000011380
Brevican.
     
 0.601
ENSCHAP00000034062
N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase.
 
   
  0.596
ENSCHAP00000060019
annotation not available
     
 0.594
nelfa
Negative elongation factor complex member A.
    
 0.556
b3galt6
Beta-1,3-galactosyltransferase 6.
    
 
 0.553
ENSCHAP00000039866
annotation not available
    
 0.544
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.