STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000006511Calcium/calmodulin-dependent protein kinase (CaM kinase) II beta 1. (590 aa)    
Predicted Functional Partners:
calm1
Calmodulin.
   
 0.947
ENSCHAP00000029416
Calmodulin-like 4a.
    
 0.914
CALML6
Calmodulin like 6.
    
 0.887
ENSCHAP00000034291
Ryanodine receptor 2b (cardiac).
    
 0.872
ENSCHAP00000009032
Phospholipase C, beta 3 (phosphatidylinositol-specific).
   
 
 0.856
ENSCHAP00000009232
Phospholipase C beta 1.
   
 
 0.856
PLCB4-2
Phospholipase C beta 4.
   
 
 0.856
LOC105901044
Sodium channel subunit beta-4-like.
   
 
  0.850
ENSCHAP00000048910
Leucine-rich repeats and guanylate kinase domain containing.
    
  0.838
ENSCHAP00000041057
annotation not available
  
0.835
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.