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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000006532Solute carrier family 39 member 6. (674 aa)    
Predicted Functional Partners:
slc30a6
Solute carrier family 30 member 6.
  
 0.649
slc30a5
Solute carrier family 30 member 5.
  
 0.605
slc39a9
Solute carrier family 39 member 9.
    
 
 0.569
LOC105895753
Zinc transporter 1-like.
  
 0.554
ENSCHAP00000043837
Solute carrier family 30 member 1a.
  
 0.554
ENSCHAP00000052840
Superoxide dismutase 2, mitochondrial.
  
  
 0.550
slc30a7
Solute carrier family 30 member 7.
  
 0.488
ENSCHAP00000029309
Solute carrier family 30 member 10.
  
 0.473
SLC39A1
Solute carrier family 39 member 1.
   
 0.448
ENSCHAP00000011826
Solute carrier family 30 member 9.
     
 0.438
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.