STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000006543Coiled-coil domain containing 103. (263 aa)    
Predicted Functional Partners:
dnai2
Dynein axonemal intermediate chain 2.
   
 
 0.964
ENSCHAP00000060746
Dynein, axonemal, intermediate chain 1, paralog 2.
   
 
 0.963
ENSCHAP00000039171
Coiled-coil domain containing 65.
   
 
 0.962
ENSCHAP00000049610
annotation not available
     
 0.959
ENSCHAP00000058691
NME/NM23 family member 8.
     
 0.959
ENSCHAP00000022969
annotation not available
   
 
 0.957
WDR63
WD repeat domain 63.
   
 
 0.930
ENSCHAP00000015252
WD repeat domain 78.
   
 
 0.930
ENSCHAP00000010200
annotation not available
     
 0.810
ENSCHAP00000012889
Dynein, axonemal, heavy polypeptide 9 like.
     
 0.810
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.