STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000006558Transmembrane protein 106C. (278 aa)    
Predicted Functional Partners:
kansl2
KAT8 regulatory NSL complex subunit 2.
    
  0.580
mcrs1
Microspherule protein 1.
    
 0.550
ENSCHAP00000016391
Macrophage stimulating 1 receptor b.
   
 
  0.539
ENSCHAP00000041906
Macrophage stimulating 1 receptor a.
   
 
  0.539
ENSCHAP00000053649
MET proto-oncogene, receptor tyrosine kinase.
   
 
  0.539
LOC105895654
Chromosome unknown open reading frame, human C12orf4.
      
 0.522
ENSCHAP00000039311
RNA polymerase II associated protein 3.
      
 0.520
ENSCHAP00000003527
Testis expressed 30.
    
  0.499
kansl3
KAT8 regulatory NSL complex subunit 3.
    
  0.499
ENSCHAP00000011418
annotation not available
    
  0.409
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.