ENSCHAP00000006562 protein (Clupea harengus)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

ENSCHAP00000006562

annotation not available (165 aa)

Predicted Functional Partners:

ENSCHAP00000003156

0.528

ENSCHAP00000008564

0.528

ENSCHAP00000012495

0.528

ENSCHAP00000053830

0.528

tnr

0.528

ENSCHAP00000011939

0.506

ENSCHAP00000031477

0.502

ADAMTS5

0.502

ENSCHAP00000039460

0.494

hapln1

0.484

Your Current Organism:

Clupea harengus

NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ADAMTS5	ENSCHAP00000006562	ENSCHAP00000052248	ENSCHAP00000006562	ADAM metallopeptidase with thrombospondin type 1 motif 5.	annotation not available	0.502
ADAMTS5	ENSCHAP00000011939	ENSCHAP00000052248	ENSCHAP00000011939	ADAM metallopeptidase with thrombospondin type 1 motif 5.	annotation not available	0.435
ADAMTS5	ENSCHAP00000031477	ENSCHAP00000052248	ENSCHAP00000031477	ADAM metallopeptidase with thrombospondin type 1 motif 5.	annotation not available	0.435
ADAMTS5	ENSCHAP00000039460	ENSCHAP00000052248	ENSCHAP00000039460	ADAM metallopeptidase with thrombospondin type 1 motif 5.	annotation not available	0.435
ENSCHAP00000003156	ENSCHAP00000006562	ENSCHAP00000003156	ENSCHAP00000006562	annotation not available	annotation not available	0.528
ENSCHAP00000003156	ENSCHAP00000008564	ENSCHAP00000003156	ENSCHAP00000008564	annotation not available	Zmp:0000000846.	0.448
ENSCHAP00000003156	ENSCHAP00000011939	ENSCHAP00000003156	ENSCHAP00000011939	annotation not available	annotation not available	0.528
ENSCHAP00000003156	ENSCHAP00000012495	ENSCHAP00000003156	ENSCHAP00000012495	annotation not available	annotation not available	0.942
ENSCHAP00000003156	ENSCHAP00000031477	ENSCHAP00000003156	ENSCHAP00000031477	annotation not available	annotation not available	0.528
ENSCHAP00000003156	ENSCHAP00000039460	ENSCHAP00000003156	ENSCHAP00000039460	annotation not available	annotation not available	0.528
ENSCHAP00000003156	ENSCHAP00000053830	ENSCHAP00000003156	ENSCHAP00000053830	annotation not available	Tenascin N.	0.598
ENSCHAP00000003156	hapln1	ENSCHAP00000003156	ENSCHAP00000046268	annotation not available	Hyaluronan and proteoglycan link protein 1.	0.649
ENSCHAP00000003156	tnr	ENSCHAP00000003156	ENSCHAP00000055355	annotation not available	Tenascin R.	0.592
ENSCHAP00000006562	ADAMTS5	ENSCHAP00000006562	ENSCHAP00000052248	annotation not available	ADAM metallopeptidase with thrombospondin type 1 motif 5.	0.502
ENSCHAP00000006562	ENSCHAP00000003156	ENSCHAP00000006562	ENSCHAP00000003156	annotation not available	annotation not available	0.528
ENSCHAP00000006562	ENSCHAP00000008564	ENSCHAP00000006562	ENSCHAP00000008564	annotation not available	Zmp:0000000846.	0.528
ENSCHAP00000006562	ENSCHAP00000011939	ENSCHAP00000006562	ENSCHAP00000011939	annotation not available	annotation not available	0.506
ENSCHAP00000006562	ENSCHAP00000012495	ENSCHAP00000006562	ENSCHAP00000012495	annotation not available	annotation not available	0.528
ENSCHAP00000006562	ENSCHAP00000031477	ENSCHAP00000006562	ENSCHAP00000031477	annotation not available	annotation not available	0.502
ENSCHAP00000006562	ENSCHAP00000039460	ENSCHAP00000006562	ENSCHAP00000039460	annotation not available	annotation not available	0.494