STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105897127Cholinesterase-like. (623 aa)    
Predicted Functional Partners:
ENSCHAP00000033279
Cytochrome b5 reductase 4.
   
 0.787
ENSCHAP00000024099
Hydroxysteroid (17-beta) dehydrogenase 8.
    
  0.773
LOC105911024
Adenine phosphoribosyltransferase 1-like.
    
  0.773
ENSCHAP00000008848
Glycerophosphocholine phosphodiesterase 1.
    
 0.731
LOC105900866
Xenotropic and polytropic retrovirus receptor 1 homolog.
     
 0.721
ENSCHAP00000039757
Ghrelin/obestatin prepropeptide.
   
 
 0.666
ENSCHAP00000027480
Glucuronidase, beta.
   
 0.658
ENSCHAP00000038357
Monoglyceride lipase.
    
 0.631
ENSCHAP00000060892
Calcium/calmodulin-dependent serine protein kinase a.
    
  0.617
dhcr7
7-dehydrocholesterol reductase.
     
 0.603
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.