STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000006582annotation not available (202 aa)    
Predicted Functional Partners:
cftr
CF transmembrane conductance regulator.
   
 0.970
msn
Moesin.
    
 0.957
RDX
Radixin.
    
 0.950
LOC105899111
Ezrin-like.
    
 0.937
EZR
Ezrin.
    
 0.937
ENSCHAP00000012910
Moesin b.
    
 0.884
nf2
Neurofibromin 2.
    
 0.815
ENSCHAP00000043462
Neurofibromin 2b (merlin).
    
 0.815
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
     
 0.789
ENSCHAP00000004032
annotation not available
    
 0.751
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.