STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000006593annotation not available (260 aa)    
Predicted Functional Partners:
ENSCHAP00000000372
Mitochondrial ribosomal protein L12.
 
 
 0.850
LOC105900583
NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial-like.
   
 
 0.558
trabd
TraB domain containing.
    
   0.518
ENSCHAP00000049557
SURF1 cytochrome c oxidase assembly factor.
   
 
 0.461
LOC105900835
Cytochrome c oxidase assembly protein COX15 homolog.
   
 
 0.460
ndufa11
NADH:ubiquinone oxidoreductase subunit A11.
   
  
 0.453
ENSCHAP00000009543
annotation not available
   
   0.439
phb
Prohibitin.
   
 
 0.439
ENSCHAP00000051683
Inner membrane protein, mitochondrial (mitofilin).
   
 
 0.421
LOC105907990
Mitochondrial chaperone BCS1.
   
  
 0.417
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.