STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000006625annotation not available (507 aa)    
Predicted Functional Partners:
ENSCHAP00000052398
annotation not available
    
 0.801
ENSCHAP00000013178
Heparan sulfate 2-O-sulfotransferase 1b.
     
 0.703
ENSCHAP00000004340
Danio rerio notum pectinacetylesterase 2 (notum2), mRNA.
    
 0.701
ENSCHAP00000013637
Notum, palmitoleoyl-protein carboxylesterase a.
    
 0.701
sdc4
Syndecan 4.
     
 0.665
LOC105906249
Frizzled-8-like.
     
 0.644
ENSCHAP00000050374
Frizzled class receptor 4.
     
 0.644
ENSCHAP00000042559
Xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I).
     
 0.641
ENSCHAP00000001958
Desert hedgehog signaling molecule.
    
 0.637
ENSCHAP00000002688
Indian hedgehog signaling molecule b.
    
 0.637
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.