STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000006736annotation not available (155 aa)    
Predicted Functional Partners:
agt
Angiotensinogen.
    
 0.731
ENSCHAP00000019636
Cathepsin F.
   
 0.700
ENSCHAP00000021622
Cathepsin C.
   
 0.692
ctsz
Cathepsin Z.
   
 0.684
ENSCHAP00000021749
annotation not available
   
 0.684
ENSCHAP00000017414
Cathepsin O.
   
 0.681
ENSCHAP00000012516
Cathepsin H.
   
 0.644
ENSCHAP00000028632
Carboxypeptidase vitellogenic like.
   
 0.600
ENSCHAP00000057401
Preproinsulin.
   
 0.568
ENSCHAP00000033911
Si:ch211-122f10.4.
   
 0.566
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.