close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
srp9Signal recognition particle 9. (86 aa)    
Predicted Functional Partners:
srp72
Signal recognition particle 72.
    
 0.999
srp19
Signal recognition particle 19.
   
 0.999
srp14
Signal recognition particle 14.
   
 0.999
ENSCHAP00000035625
Signal recognition particle 68.
   
 0.994
ENSCHAP00000040261
annotation not available
   
 0.994
ENSCHAP00000008683
FAU ubiquitin like and ribosomal protein S30 fusion a.
    
   0.991
rpl34
Ribosomal protein L34.
   
 
 0.963
srpra
SRP receptor subunit alpha.
   
 0.961
ENSCHAP00000007645
SRP receptor subunit beta.
   
 0.952
rpl23a
Ribosomal protein L23a.
    
 
 0.945
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.