close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105902409PERQ amino acid-rich with GYF domain-containing protein 1-like. (1115 aa)    
Predicted Functional Partners:
ENSCHAP00000012793
Trinucleotide repeat containing adaptor 6C1.
   
 0.841
ENSCHAP00000058033
Trinucleotide repeat containing adaptor 6A.
   
 0.841
ENSCHAP00000000024
Si:dkey-217f16.6.
    
 0.813
ENSCHAP00000010230
DEAD (Asp-Glu-Ala-Asp) box helicase 61.
    
 0.808
ENSCHAP00000024189
annotation not available
    
 0.808
ENSCHAP00000054422
DEAD (Asp-Glu-Ala-Asp) box helicase 6.
    
 0.808
ENSCHAP00000046642
SPT6 homolog, histone chaperone and transcription elongation factor.
   
 
  0.801
eif4e2
Eukaryotic translation initiation factor 4E family member 2.
    
 
 0.784
LOC105891435
Eukaryotic translation initiation factor 4E type 2-like.
    
 
 0.784
supt16h
SPT16 homolog, facilitates chromatin remodeling subunit.
   
 
 0.773
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.