STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000006895annotation not available (2079 aa)    
Predicted Functional Partners:
ENSCHAP00000009160
RAN binding protein 2.
   
 0.999
nup98
Nucleoporin 98.
   
0.998
gle1
GLE1 RNA export mediator.
    
 0.997
nup93
Nucleoporin 93.
    
 0.996
ENSCHAP00000014546
Nucleoporin 107.
   
 0.996
nup85
Nucleoporin 85.
    
 0.996
ENSCHAP00000022068
Nucleoporin 205.
   
 0.996
ENSCHAP00000024896
Nucleoporin 88.
    
 0.996
ENSCHAP00000037889
Nucleoporin 155.
    
 0.996
seh1l
SEH1 like nucleoporin.
    
 0.996
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.