STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000006920Protein kinase C, gamma. (723 aa)    
Predicted Functional Partners:
pla2g4a
Phospholipase A2 group IVA.
   
 0.878
ENSCHAP00000036066
Mechanistic target of rapamycin kinase.
    
 0.866
ENSCHAP00000038050
Phospholipase C, epsilon 1.
   
 
 0.835
ENSCHAP00000050149
Phospholipase C, gamma 1.
    
 0.832
ENSCHAP00000026217
Myosin IIIA.
   
 
0.818
ENSCHAP00000026726
annotation not available
   
  0.818
ENSCHAP00000054831
Myosin IIIB.
   
 
0.818
ENSCHAP00000032432
annotation not available
   
  0.814
ENSCHAP00000060388
Caspase recruitment domain family, member 11.
    
 0.734
ENSCHAP00000019934
Neutrophil cytosolic factor 1.
   
 0.732
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.