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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000006992Transmembrane protein 145. (588 aa)    
Predicted Functional Partners:
AP3B2
Adaptor related protein complex 3 subunit beta 2.
   
 
 0.806
pafah1b1
Platelet activating factor acetylhydrolase 1b regulatory subunit 1.
    
 0.732
ENSCHAP00000038251
Platelet-activating factor acetylhydrolase 1b, regulatory subunit 1b.
    
 0.732
ENSCHAP00000013150
Adaptor related protein complex 3 subunit delta 1.
    
 0.692
ENSCHAP00000012208
Adaptor related protein complex 2 subunit alpha 1.
    
  0.684
ap2s1
Adaptor related protein complex 2 subunit sigma 1.
     
 0.599
ENSCHAP00000014772
Protein kinase cAMP-dependent type II regulatory subunit beta.
   
 
  0.596
LOC105906428
cAMP-dependent protein kinase type II-alpha regulatory subunit-like.
   
 
  0.596
ENSCHAP00000017003
BAR/IMD domain containing adaptor protein 2 like 2a.
     
 0.595
ENSCHAP00000009106
Adaptor related protein complex 1 subunit gamma 2.
    
  0.557
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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