Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000007047annotation not available (286 aa)    
Predicted Functional Partners:
mysm1
Myb like, SWIRM and MPN domains 1.
    
  0.513
ENSCHAP00000021246
Translocase of outer mitochondrial membrane 20.
    
 0.511
ENSCHAP00000030862
AT rich interactive domain 4A (RBP1-like).
    
 0.511
ENSCHAP00000000993
annotation not available
    
 0.488
ENSCHAP00000005391
annotation not available
    
 0.488
LOC105889594
Zona pellucida sperm-binding protein 3-like.
    
 0.488
ENSCHAP00000008770
Neuralized E3 ubiquitin protein ligase 1B.
    
  0.457
ENSCHAP00000014774
Neuralized E3 ubiquitin protein ligase 1Aa.
    
  0.457
ENSCHAP00000046663
SMC5-SMC6 complex localization factor 1.
   
 0.454
mib2
Mindbomb E3 ubiquitin protein ligase 2.
   
  0.453
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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