STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
me1Malic enzyme 1. (591 aa)    
Predicted Functional Partners:
ENSCHAP00000044661
Fumarate hydratase.
  
 
 0.953
mdh2
Malate dehydrogenase 2.
  
 0.935
LOC105913004
Pyruvate kinase PKM-like.
  
 0.922
ENSCHAP00000007866
Pyruvate kinase M1/2a.
  
 0.922
ENSCHAP00000010135
Pyruvate dehydrogenase E1 alpha 1 subunit a.
  
 0.921
ENSCHAP00000020378
Pyruvate kinase M1/2b.
  
 0.921
mdh1
Malate dehydrogenase 1.
  
 0.915
LOC105909395
Malate dehydrogenase, cytoplasmic-like.
  
 0.915
pdhb
Pyruvate dehydrogenase E1 beta subunit.
  
 
 0.910
ENSCHAP00000009931
Pyruvate carboxylase a.
   
 0.907
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.