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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000007102Mitotic arrest deficient 1 like 1. (466 aa)    
Predicted Functional Partners:
mad2l1
Mitotic arrest deficient 2 like 1.
    
 0.994
ENSCHAP00000038482
Ttk protein kinase.
    
 0.979
FZR1
Fizzy-related protein homolog.
   
 0.975
ENSCHAP00000048563
Fizzy/cell division cycle 20 related 1b.
   
 0.975
ENSCHAP00000049093
annotation not available
    
 0.971
ENSCHAP00000058921
BUB1 mitotic checkpoint serine/threonine kinase Bb.
    
 0.971
ENSCHAP00000011669
BUB3 mitotic checkpoint protein.
    
 0.961
ENSCHAP00000028831
annotation not available
   
 0.956
ENSCHAP00000004522
Danio rerio inturned planar cell polarity protein (intu), mRNA.
   
 0.950
ENSCHAP00000056266
Origin recognition complex, subunit 2.
    
 
 0.946
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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