STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105906523Non-muscle caldesmon-like. (565 aa)    
Predicted Functional Partners:
ksr1
Kinase suppressor of ras 1.
    
 0.805
ENSCHAP00000013496
Kinase suppressor of ras 2.
    
 0.805
MAPKAPK2
MAPK activated protein kinase 2.
    
 0.771
ENSCHAP00000053449
MAPK activated protein kinase 2b.
    
 0.771
ENSCHAP00000047220
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
   
 
 0.714
ENSCHAP00000029505
TANK-binding kinase 1.
   
 
 0.706
ENSCHAP00000012423
Polo-like kinase 1 (Drosophila).
     
 0.623
ENSCHAP00000052842
annotation not available
     
 0.623
plk3
Polo like kinase 3.
     
 0.623
ENSCHAP00000059623
Polo-like kinase 2b (Drosophila).
     
 0.623
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.