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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000007164Eukaryotic translation initiation factor 4Ba. (626 aa)    
Predicted Functional Partners:
eif2s3
Eukaryotic translation initiation factor 2 subunit gamma.
   
 0.962
LOC105895537
Eukaryotic initiation factor 4A-I-like.
   
 0.957
eif4a2
Eukaryotic translation initiation factor 4A2.
   
 0.957
eif2s1
Eukaryotic translation initiation factor 2 subunit alpha.
   
 0.946
ENSCHAP00000038186
Eukaryotic translation initiation factor 3, subunit 10 (theta).
   
 0.933
ENSCHAP00000001034
Eukaryotic translation initiation factor 3, subunit C.
   
 0.919
ENSCHAP00000042990
Eukaryotic translation initiation factor 4h.
   
 
0.919
eif3h
Eukaryotic translation initiation factor 3 subunit H.
   
 0.916
ENSCHAP00000016659
Eukaryotic translation initiation factor 3, subunit F.
   
 0.911
ENSCHAP00000005173
annotation not available
   
 0.899
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.