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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000007174Mitochondrial ribosomal protein L17. (164 aa)    
Predicted Functional Partners:
ENSCHAP00000000372
Mitochondrial ribosomal protein L12.
  
 
 0.997
ENSCHAP00000005646
Ribosomal protein L23.
  
 
 0.997
mrps16
Mitochondrial ribosomal protein S16.
  
 
 0.997
rpl35
Ribosomal protein L35.
  
 
 0.997
rps18
Ribosomal protein S18.
  
 
 0.997
mrps9
Mitochondrial ribosomal protein S9.
  
 
 0.997
rps11
Ribosomal protein S11.
  
 
 0.997
rpl11
Ribosomal protein L11.
  
 
 0.997
rps3
Ribosomal protein S3.
  
 
 0.997
ENSCHAP00000035402
Mitochondrial ribosomal protein S6.
  
 
 0.997
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.