STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000007176annotation not available (139 aa)    
Predicted Functional Partners:
ENSCHAP00000015151
annotation not available
    
  0.627
ENSCHAP00000007118
annotation not available
  
 
  0.522
ENSCHAP00000029486
annotation not available
  
     0.520
ENSCHAP00000004683
annotation not available
  
     0.494
ENSCHAP00000009323
annotation not available
  
 
  0.492
ENSCHAP00000001855
annotation not available
  
 
  0.490
GNG4
G protein subunit gamma 4.
   
   0.489
LGR5
Leucine rich repeat containing G protein-coupled receptor 5.
    
  0.485
lgr4
Leucine rich repeat containing G protein-coupled receptor 4.
    
  0.485
ENSCHAP00000024727
Relaxin family peptide receptor 1.
    
  0.485
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.