STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000007183Si:ch211-161h7.8. (158 aa)    
Predicted Functional Partners:
suox
Sulfite oxidase.
  
 
 0.932
ENSCHAP00000052840
Superoxide dismutase 2, mitochondrial.
  
 
 0.916
ybey
ybeY metalloendoribonuclease.
   
  0.880
rps11
Ribosomal protein S11.
  
  0.872
dap3
Death associated protein 3.
   
  0.870
ENSCHAP00000020796
Molybdenum cofactor synthesis 2.
    
 0.851
LOC105908670
Cystathionine beta-synthase-like.
  
 
 0.848
ENSCHAP00000007508
Mitochondrial ribosomal protein L21.
  
 
 0.832
mrpl3
Mitochondrial ribosomal protein L3.
  
   0.825
mrpl13
Mitochondrial ribosomal protein L13.
  
   0.823
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.