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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tbx15T-box transcription factor 15. (614 aa)    
Predicted Functional Partners:
dr1
Down-regulator of transcription 1.
     
 0.824
ENSCHAP00000025324
annotation not available
     
 0.752
CTNNB1
Catenin beta 1.
     
 0.752
ENSCHAP00000003247
annotation not available
     
 0.642
ENSCHAP00000027043
annotation not available
     
 0.642
ENSCHAP00000058056
Ets2 repressor factor like 3.
     
 0.642
ENSCHAP00000010671
Junction plakoglobin a.
     
 0.613
ENSCHAP00000030901
Junction plakoglobin b.
     
 0.613
ENSCHAP00000026782
Contactin associated protein like 3.
      
 0.559
wars1
tryptophanyl-tRNA synthetase 1.
      
 0.540
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.