STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000007244Major facilitator superfamily domain containing 11. (442 aa)    
Predicted Functional Partners:
ENSCHAP00000007397
annotation not available
   
 
  0.584
LOC105913280
3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase-like.
   
 
  0.584
ENSCHAP00000027192
Hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase.
   
 
  0.584
mat2b
Methionine adenosyltransferase 2B.
   
 
  0.583
mfsd10
Major facilitator superfamily domain containing 10.
      
 0.517
LOC105897800
L-threonine 3-dehydrogenase, mitochondrial-like.
   
 
  0.502
LOC105895756
L-threonine 3-dehydrogenase, mitochondrial-like.
   
 
  0.502
ENSCHAP00000044425
Tissue specific transplantation antigen P35B.
   
 
  0.502
LOC105896089
L-threonine 3-dehydrogenase, mitochondrial-like.
   
 
  0.502
uxs1
UDP-glucuronate decarboxylase 1.
   
 
  0.502
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.