STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000007263annotation not available (1348 aa)    
Predicted Functional Partners:
ENSCHAP00000030807
S100 calcium binding protein A10b.
   
 0.956
LOC105891828
Protein S100-A1-like.
   
 0.956
ENSCHAP00000040258
Annexin A2a.
   
 0.937
ENSCHAP00000051909
annotation not available
  
 
 
0.851
ENSCHAP00000003418
Zgc:101785.
    
 0.841
ENSCHAP00000017053
annotation not available
    
 0.841
ENSCHAP00000051924
annotation not available
 
 
 
  0.840
ENSCHAP00000038996
Annexin A1a.
   
 0.824
MSL3
MSL complex subunit 3.
    
 0.745
mysm1
Myb like, SWIRM and MPN domains 1.
    
 0.739
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.