STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105890180Mitogen-activated protein kinase kinase kinase 3-like. (612 aa)    
Predicted Functional Partners:
ENSCHAP00000053588
Mitogen-activated protein kinase kinase 5.
   
 0.967
ENSCHAP00000030067
P21 protein (Cdc42/Rac)-activated kinase 1.
    
0.912
map3k4
Mitogen-activated protein kinase kinase kinase 4.
    
0.910
ccm2
CCM2 scaffold protein.
    
 0.905
ENSCHAP00000009243
annotation not available
  
 
0.904
ENSCHAP00000029091
P21 protein (Cdc42/Rac)-activated kinase 2a.
  
 
0.904
pak2
P21 (RAC1) activated kinase 2.
    
0.897
LOC105894965
Dual specificity mitogen-activated protein kinase kinase 6-like.
  
0.863
LOC105894130
NF-kappa-B essential modulator-like.
    
 0.863
LOC105893604
Dual specificity mitogen-activated protein kinase kinase 6-like.
  
0.863
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.