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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aig1Androgen induced 1. (231 aa)    
Predicted Functional Partners:
ENSCHAP00000033045
annotation not available
      
 0.522
pou1f1
POU class 1 homeobox 1.
      
 0.507
LOC105895525
Histidine N-acetyltransferase-like.
      
 0.493
ENSCHAP00000027918
CD36 molecule (thrombospondin receptor).
      
 0.434
ENSCHAP00000020158
Ring finger protein 34a.
      
 0.431
ENSCHAP00000047502
Ring finger protein 34b.
      
 0.431
prelid3b
PRELI domain containing 3B.
      
 0.424
prelid3a
PRELI domain containing 3A.
      
 0.424
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.