STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000007333Melanin-concentrating hormone receptor 1b. (328 aa)    
Predicted Functional Partners:
LOC105903693
Melanin-concentrating hormone receptor 2-like.
   
 
 
0.829
LOC105901956
Melanin-concentrating hormone receptor 1-like.
  
  
 
0.773
mchr2
Melanin concentrating hormone receptor 2.
   
 
 
0.772
pmch
Pro-melanin concentrating hormone.
     
 0.758
bbs1
Bardet-Biedl syndrome 1.
     
 0.720
bbs2
Bardet-Biedl syndrome 2.
     
 0.718
ENSCHAP00000051136
Bardet-Biedl syndrome 4.
     
 0.699
ENSCHAP00000055455
annotation not available
    
 0.675
ENSCHAP00000003704
Proopiomelanocortin a.
    
 0.674
ENSCHAP00000003716
Proopiomelanocortin a.
    
 0.674
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.