STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000007420Synaptogyrin 1b. (239 aa)    
Predicted Functional Partners:
ENSCHAP00000034605
annotation not available
   
  
 0.686
MOK
MOK protein kinase.
   
  
 0.686
tab1
TGF-beta activated kinase 1 (MAP3K7) binding protein 1.
 
 
    0.515
ENSCHAP00000016490
Intersectin 2b.
      
 0.445
ENSCHAP00000057857
Intersectin 2a.
      
 0.445
ENSCHAP00000035944
Protein interacting with prkca 1.
   
  
 0.439
ENSCHAP00000000387
annotation not available
      
 0.432
ENSCHAP00000035267
Intersectin 1 (SH3 domain protein).
      
 0.432
ENSCHAP00000021772
Zinc finger, CCHC domain containing 4.
   
    0.407
ENSCHAP00000049790
Chromosome 9 open reading frame 78.
   
   0.406
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.