STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000007452Nuclear receptor subfamily 0, group B, member 2b. (288 aa)    
Predicted Functional Partners:
NR5A1
Nuclear receptor subfamily 5 group A member 1.
   
0.845
nr5a2
Nuclear receptor subfamily 5 group A member 2.
   
0.845
ENSCHAP00000058889
Nuclear receptor subfamily 5, group A, member 1a.
   
0.845
ENSCHAP00000019849
Nuclear receptor corepressor 2.
    
 0.764
ENSCHAP00000031150
Nuclear receptor corepressor 1.
    
 0.764
hnf4a
Hepatocyte nuclear factor 4 alpha.
   
0.727
ENSCHAP00000018326
Hepatocyte nuclear factor 4, gamma.
   
0.727
ENSCHAP00000022121
Peroxisome proliferator-activated receptor alpha b.
   
 0.685
PPARG
Peroxisome proliferator activated receptor gamma.
   
 0.685
ENSCHAP00000041166
annotation not available
   
 0.685
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.