STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NACC2NACC family member 2. (598 aa)    
Predicted Functional Partners:
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
  0.601
ppil6
Peptidylprolyl isomerase like 6.
    
  0.599
rps2
Ribosomal protein S2.
   
 0.570
mysm1
Myb like, SWIRM and MPN domains 1.
    
 0.560
mrps10
Mitochondrial ribosomal protein S10.
    
 0.537
ENSCHAP00000049610
annotation not available
    
 0.535
ENSCHAP00000058691
NME/NM23 family member 8.
    
 0.535
LOC105912643
POU domain, class 5, transcription factor 1-like.
    
 0.533
ENSCHAP00000033279
Cytochrome b5 reductase 4.
    
  0.518
ENSCHAP00000021246
Translocase of outer mitochondrial membrane 20.
    
 0.513
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.