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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000007524Solute carrier family 24 member 4b. (528 aa)    
Predicted Functional Partners:
ENSCHAP00000034061
annotation not available
    
   0.749
ENSCHAP00000004410
RAD23 homolog A, nucleotide excision repair protein b.
    
   0.531
ENSCHAP00000018159
RAD23 homolog A, nucleotide excision repair protein a.
    
   0.531
ENSCHAP00000018170
annotation not available
    
   0.531
RAD23B
RAD23 homolog B, nucleotide excision repair protein.
    
   0.531
slc8a1
Solute carrier family 8 member A1.
   
 
0.519
ENSCHAP00000008307
Solute carrier family 8 member 2a.
   
 
0.519
LOC105894163
Sodium/calcium exchanger 1-like.
   
 
0.519
ENSCHAP00000010317
Solute carrier family 8 member 4a.
   
 
0.519
ENSCHAP00000043704
Solute carrier family 8 member 1a.
   
 
0.519
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.