STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC1059132803 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase-like. (374 aa)    
Predicted Functional Partners:
ENSCHAP00000008683
FAU ubiquitin like and ribosomal protein S30 fusion a.
   
 0.994
hsd17b7
Hydroxysteroid 17-beta dehydrogenase 7.
   
 0.986
LOC105904925
Lanosterol 14-alpha demethylase.
  
 0.975
sc5d
sterol-C5-desaturase.
  
 0.961
ENSCHAP00000004017
Farnesyl-diphosphate farnesyltransferase 1.
  
 
 0.960
ENSCHAP00000006962
Cytochrome P450, family 7, subfamily B, polypeptide 1.
  
 0.956
ENSCHAP00000010211
Sigma non-opioid intracellular receptor 1.
   
 
 0.941
LOC105893799
Cholesterol 7-alpha-monooxygenase.
  
 0.939
ERG28
Ergosterol biosynthesis 28 homolog.
   
 
 0.939
ENSCHAP00000053873
Phosphoethanolamine methyltransferase.
   
 0.936
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.