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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105900091Kinetochore-associated protein NSL1 homolog. (237 aa)    
Predicted Functional Partners:
dsn1
DSN1 component of MIS12 kinetochore complex.
   
 0.998
ENSCHAP00000000975
Si:dkey-6i22.5.
    
 0.997
ENSCHAP00000020972
MIS12 kinetochore complex component.
    
 0.996
ENSCHAP00000023187
annotation not available
   
 0.983
spc24
SPC24 component of NDC80 kinetochore complex.
   
 0.968
nuf2
NUF2 component of NDC80 kinetochore complex.
   
 0.968
ENSCHAP00000046868
NDC80 kinetochore complex component.
   
 0.962
ENSCHAP00000002271
SPC25 component of NDC80 kinetochore complex.
   
 0.955
ENSCHAP00000049093
annotation not available
   
 0.875
ENSCHAP00000058921
BUB1 mitotic checkpoint serine/threonine kinase Bb.
   
 0.875
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.