STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000007684Phospholipase A1 member A. (466 aa)    
Predicted Functional Partners:
ptdss2
Phosphatidylserine synthase 2.
     
 0.895
ENSCHAP00000019851
Membrane bound O-acyltransferase domain containing 1.
    
 0.873
lpcat4
Lysophosphatidylcholine acyltransferase 4.
    
  0.860
ENSCHAP00000012489
Lysophosphatidylcholine acyltransferase 3.
     
 0.856
ptdss1
Phosphatidylserine synthase 1.
     
 0.849
ENSCHAP00000021407
annotation not available
     
 0.849
ENSCHAP00000022398
Membrane bound O-acyltransferase domain containing 2a.
     
 0.849
LOC105894439
Membrane-bound O-acyltransferase domain-containing protein 2-like.
     
 0.849
ENSCHAP00000013279
Mitogen-activated protein kinase 7.
    
  0.813
ENSCHAP00000026943
Mitogen-activated protein kinase 3.
    
  0.813
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.