STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
stx12Syntaxin 12. (269 aa)    
Predicted Functional Partners:
ENSCHAP00000010311
Vesicle transport through interaction with t-SNAREs 1A.
   
 0.984
ENSCHAP00000000740
Vesicle-associated membrane protein 1.
   
 0.983
gosr1
Golgi SNAP receptor complex member 1.
   
 0.979
ENSCHAP00000014840
Vacuolar protein sorting 16 homolog.
    
 0.976
stx8
Syntaxin 8.
    
 0.976
ENSCHAP00000034960
YKT6 v-SNARE homolog (S. cerevisiae).
   
 0.975
vps11
VPS11 core subunit of CORVET and HOPS complexes.
   
 0.970
vamp7
Vesicle associated membrane protein 7.
   
 0.969
vps18
VPS18 core subunit of CORVET and HOPS complexes.
    
 0.968
ENSCHAP00000007653
VPS41 subunit of HOPS complex.
   
 0.967
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.