Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000007744annotation not available (532 aa)    
Predicted Functional Partners:
LOC105890375
Heterogeneous nuclear ribonucleoprotein K-like.
    
 
 0.632
ENSCHAP00000054417
Heterogeneous nuclear ribonucleoprotein K.
    
 
 0.632
MSI1
Musashi RNA binding protein 1.
    
 
 0.614
ENSCHAP00000017385
Musashi RNA-binding protein 2a.
    
 
 0.614
LOC105899087
RNA-binding protein Musashi homolog 1-like.
    
 
 0.614
ENSCHAP00000056546
Musashi RNA-binding protein 2b.
    
 
 0.614
ENSCHAP00000037425
Tumor protein p53 binding protein, 1.
    
   0.566
ENSCHAP00000048692
KH domain containing 4, pre-mRNA splicing factor.
      
 0.485
snrpd2
Small nuclear ribonucleoprotein D2 polypeptide.
      
 0.481
HNRNPLL
Heterogeneous nuclear ribonucleoprotein L like.
    
 
 0.474
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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