STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000007759annotation not available (487 aa)    
Predicted Functional Partners:
suox
Sulfite oxidase.
     
 0.727
rfx2
Regulatory factor X2.
    
 
 0.720
ENSCHAP00000061310
Regulatory factor X, 3 (influences HLA class II expression).
    
 
 0.712
C6orf118
Chromosome 6 open reading frame 118.
   
    0.707
ENSCHAP00000038384
annotation not available
    
 0.589
ENSCHAP00000024681
E1A binding protein p300 a.
    
 0.584
ENSCHAP00000025501
CREB binding protein a.
    
 0.584
ENSCHAP00000031900
E1A binding protein p300 b.
    
 0.584
ENSCHAP00000045259
Centromere protein P.
    
 0.584
LOC105899433
NAD-dependent protein deacylase sirtuin-5, mitochondrial-like.
    
 0.580
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.