STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IGFBP4Insulin like growth factor binding protein 4. (292 aa)    
Predicted Functional Partners:
LOC105904486
Insulin-like growth factor II.
   
 0.797
LOC105908126
Insulin-like growth factor II.
   
 0.797
ENSCHAP00000011045
Pregnancy-associated plasma protein A, pappalysin 1a.
    
 0.558
igf1
Insulin like growth factor 1.
     
 0.558
ENSCHAP00000055805
Pappalysin 2.
    
 0.558
ENSCHAP00000055813
annotation not available
    
 0.558
ENSCHAP00000002651
annotation not available
    
 0.400
ENSCHAP00000012876
TAO kinase 3a.
    
 0.400
VSIG10
V-set and immunoglobulin domain containing 10.
    
 0.400
ENSCHAP00000016961
annotation not available
    
 0.400
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.