STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000007796annotation not available (1925 aa)    
Predicted Functional Partners:
ENSCHAP00000042821
General transcription factor IIIC, polypeptide 3.
    
 0.994
ENSCHAP00000017014
General transcription factor IIIC, polypeptide 2, beta.
   
 0.993
ENSCHAP00000057192
General transcription factor IIIC, polypeptide 5.
   
 0.987
gtf3c4
General transcription factor IIIC subunit 4.
   
 0.987
ENSCHAP00000057060
General transcription factor IIIC, polypeptide 5.
   
 0.971
ENSCHAP00000014041
annotation not available
    
 0.969
ENSCHAP00000048114
BRF2 RNA polymerase III transcription initiation factor subunit.
   
 
 0.946
ENSCHAP00000017311
Zinc finger protein 512.
   
 0.921
ENSCHAP00000047081
annotation not available
   
 0.921
ENSCHAP00000008831
annotation not available
   
 
 0.914
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.