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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000007806Solute carrier family 10 member 3. (471 aa)    
Predicted Functional Partners:
snapin
SNAP associated protein.
     
 0.666
ENSCHAP00000061057
Biogenesis of lysosomal organelles complex-1, subunit 2.
     
 0.659
ENSCHAP00000047052
Biogenesis of lysosomal organelles complex-1, subunit 3.
     
 0.644
bloc1s5
Biogenesis of lysosomal organelles complex 1 subunit 5.
     
 0.637
ENSCHAP00000025808
annotation not available
   
 
 0.619
LOC105910270
Biogenesis of lysosome-related organelles complex 1 subunit 4-like.
     
 0.618
hps5
HPS5 biogenesis of lysosomal organelles complex 2 subunit 2.
     
 0.609
ENSCHAP00000012269
HPS1 biogenesis of lysosomal organelles complex 3 subunit 1.
     
 0.602
ENSCHAP00000057899
HPS3 biogenesis of lysosomal organelles complex 2 subunit 1.
     
 0.587
ENSCHAP00000016059
Solute carrier family 10 member 7.
      
 0.516
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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