STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000007813Ral GTPase activating protein, alpha subunit 1 (catalytic). (2652 aa)    
Predicted Functional Partners:
ENSCHAP00000014520
annotation not available
   
 0.790
ENSCHAP00000054152
Ral GTPase activating protein, beta subunit (non-catalytic).
   
 0.790
fam91a1
Family with sequence similarity 91 member A1.
     
 0.688
rhoj
Ras homolog family member J.
    
  0.622
LOC105900041
Rho-related GTP-binding protein RhoQ-like.
    
  0.622
rhoq
Ras homolog family member Q.
    
  0.622
rhoh
Ras homolog family member H.
    
  0.622
nkiras1
NFKB inhibitor interacting Ras like 1.
    
 
 0.613
LOC105893231
Rho-related GTP-binding protein RhoG-like.
    
 0.584
LOC105905854
Rho-related GTP-binding protein RhoG-like.
    
 0.584
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.