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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000007866Pyruvate kinase M1/2a. (665 aa)    
Predicted Functional Partners:
ENSCHAP00000043204
Glucose-6-phosphate isomerase b.
  
 
 0.982
LOC105908805
L-lactate dehydrogenase A chain.
  
 0.956
rpl11
Ribosomal protein L11.
  
 
 0.954
rpl23a
Ribosomal protein L23a.
  
 
 0.953
rps18
Ribosomal protein S18.
  
 0.951
rpl9
Ribosomal protein L9.
  
   0.951
eno1
Enolase 1.
  
 0.949
ENSCHAP00000051710
Enolase 4.
  
 0.948
rps3
Ribosomal protein S3.
  
 
 0.947
h6pd
Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.
  
 
 0.946
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.