STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
serpinh1Serpin family H member 1. (409 aa)    
Predicted Functional Partners:
ppib
Peptidylprolyl isomerase B.
   
 0.707
ENSCHAP00000005337
annotation not available
    
 0.695
ENSCHAP00000061494
annotation not available
    
 0.695
ENSCHAP00000011059
annotation not available
    
  0.693
ENSCHAP00000040789
annotation not available
    
 0.678
ENSCHAP00000042763
Peptidylprolyl isomerase C.
   
 0.659
ENSCHAP00000000006
annotation not available
   
 
 0.609
LOC105890809
Peptidyl-prolyl cis-trans isomerase FKBP10-like.
   
 
 0.609
ENSCHAP00000010652
Collagen, type XXVIII, alpha 2a.
   
 
 0.590
ENSCHAP00000025023
annotation not available
    
 0.590
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.