STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105911417Zinc transporter ZIP8-like. (463 aa)    
Predicted Functional Partners:
slc39a14
Solute carrier family 39 member 14.
  
  
 
0.854
ENSCHAP00000022702
Solute carrier family 39 member 8.
  
  
 
0.851
ENSCHAP00000015511
PRP3 pre-mRNA processing factor 3 homolog (yeast).
 
 
    0.571
ENSCHAP00000029309
Solute carrier family 30 member 10.
  
 0.565
slc30a6
Solute carrier family 30 member 6.
  
 0.550
ENSCHAP00000052840
Superoxide dismutase 2, mitochondrial.
  
  
 0.550
slc30a5
Solute carrier family 30 member 5.
  
 0.527
SLC39A1
Solute carrier family 39 member 1.
   
 0.491
LOC105895753
Zinc transporter 1-like.
  
 0.489
ENSCHAP00000043837
Solute carrier family 30 member 1a.
  
 0.489
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.