Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000007975Elastin microfibril interfacer 1b. (1178 aa)    
Predicted Functional Partners:
ENSCHAP00000026922
Myotubularin related protein 9.
    
   0.848
ENSCHAP00000044837
Zgc:154055.
    
   0.848
ift20
Intraflagellar transport 20.
    
   0.688
svep1
Sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1.
    
 0.651
wnt4
Wnt family member 4.
    
 
 0.500
uso1
USO1 vesicle transport factor.
     
 0.476
ENSCHAP00000032024
Fucosyltransferase 11 (alpha (1,3) fucosyltransferase).
     
  0.459
ENSCHAP00000008136
Ketohexokinase.
      
 0.449
ENSCHAP00000044828
annotation not available
      
 0.433
mettl26
Methyltransferase like 26.
      
 0.433
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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