STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000007982T-cell receptor alpha/delta variable 22.0. (115 aa)    
Predicted Functional Partners:
ENSCHAP00000015151
annotation not available
    
  0.665
ENSCHAP00000000884
annotation not available
    
  0.585
LOC105890180
Mitogen-activated protein kinase kinase kinase 3-like.
    
  0.585
ENSCHAP00000019911
Mitogen-activated protein kinase kinase kinase 3.
    
  0.585
ENSCHAP00000001855
annotation not available
  
 
  0.551
ENSCHAP00000013621
annotation not available
  
 
  0.549
ENSCHAP00000013524
annotation not available
    
 0.539
ENSCHAP00000001504
annotation not available
  
 
  0.528
ENSCHAP00000002021
annotation not available
  
 
  0.515
ENSCHAP00000008629
annotation not available
  
     0.512
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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