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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000007986Potassium voltage-gated channel, subfamily H (eag-related), member 4a. (737 aa)    
Predicted Functional Partners:
ENSCHAP00000044226
annotation not available
    
 0.629
KCNAB3
Voltage-gated potassium channel subunit beta-2-like.
    
 0.629
LOC105908072
Voltage-gated potassium channel subunit beta-2-like.
    
 0.574
LOC105894315
Voltage-gated potassium channel subunit beta-2.
    
 0.574
ENSCHAP00000032797
Potassium voltage-gated channel, shaker-related subfamily, beta member 1 a.
    
 0.574
ENSCHAP00000053644
N(alpha)-acetyltransferase 35, NatC auxiliary subunit.
   
    0.497
KCNE2
Potassium voltage-gated channel subfamily E regulatory subunit 2.
    
 0.423
kcng1
Potassium voltage-gated channel modifier subfamily G member 1.
     
 0.414
SLITRK1
SLIT and NTRK like family member 1.
      
 0.400
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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